Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891139.1_cds_XP_016445873.1_40788
CDS Infomation

[gene=LOC107771062] [db_xref=GeneID:107771062] [protein=probable pectinesterase/pectinesterase inhibitor 51] [protein_id=XP_016445873.1] [location=complement(join(37171..37859,50458..51394))] [gbkey=CDS]
Sequence

ATGGCTTCTCATTTCTCCCTACCATTCCTCTCCTTCTTCCTCTTCGTCTCTCTAGTCTCT
TCCTCCATTTCTCAGCCTCCTTCCCCTTCTCCTTCGCCATCTCCAAATATTCCTATTGAA
ATCCAAGGAGCTTGCAAAGCTTCACGCGACCCACCAACATGCGAAGCCTCAATATTAACA
GACCCGTCAAATCTAACACCCGTTCAAATCATCCTCTCCGCATTGGCCGTCTCTTCTCAA
AACCTGACGAATGCTCAATCAATGGTGAAAAACCTCCTCGACACCTCCGCCGGCAACGTG
AACCTCACAGTCGCCGCGAAAAATTGTCTTCTCGGATTCAACTATTCGGCTTACAGGTAC
AATCTAACGGCTGCTGCGTTGCCACGTGGCGAAATCAAGGACGCTCGTGCATGGATGAGC
GCTGCCTTAGGGTACCAAATAGGCTGTTCGTCTAATTTACTCAAAGTAAATGAGACAATT
CAAGTGGCCGAAACGTTAGAGGTAATGAATACGTTAATTAATTTCACTACAAATGCGTTA
TGGATGACGGTGAGTTATGATATCCACGGGAATGATACCGGGTTATGGGGCCCACCCAAA
ACCGAGCGAGACGGGTTCTGGGAACCCGGGTCCGGGTCCGGGTTTGAGTTTAAAGGTGTT
GTTCCGTCGGGTTTGAACCCGAATGTGACGGTTTGTAAAGAGGGTGTTTGTGACTATAAG
ATGGTGCAGGAGGCGGTGAATGCGACACCGGATAATTTGGGACCCTGGAAGTTTGTGATA
TGGATCAAAGCCGGGTTGTATGATGAGATAGTTCGGGTCCCGTTGGAGAAGAGGAATGTG
GTATTTTTGGGTGATGGCATGGGTAAAACCGTCATTACGGGTTCGTTGAGTGTTGGCCTC
GTGCCTGGAATGACGACTTATGAATCTGCCACCGTTGGAGTAAGTGGAGATGGATTCATG
GCCAGTGGTCTAACAATCCAAAACACAGCAGGTATTGGTGCTGGACAAGCAGTAGCCTTT
CGATCCGATAGCGATCTTTCCATAATCCAATACTGCGAGTTCCTCGGCAATCAAGACACT
CTCTACACCCAATCTTTACGCCAATACTACAAATCCTGTCGCGTTCAAGGTAGCGTAGAC
TTCATTTTTGGTAACGCAGCTGCAATTTTCCAGGACTGTGACATTCTAGTCGCGCCCCGA
TTACTCAATCCTGAGAAGGGTGAGAAAAATGCAGTAACAGCACACGGTAGATTAGACCCC
GGACAATCAACTGGATATGTGTTCCAAAATTGTTCAATTAATGGAACTGAAGAGTACATG
ACATTGTACCATAGTAATCCTAAAGTGCATAAAACTTTTCTTGGAAGGCCATGGAAAGAG
TACTCGAGAACGGTATTTATAAATAGTAATTTGGATGTTTTGATTAATTCTGAAGGATGG
ATGCCTTGGAATGGCGAGTTTGCTTTGGCAACACTTTACTATGGTGAGTTTAATAATAGT
GGTGCTGGGGCTAATATAACAGGGCGAGTGACATGGAGTAATCAAATTCCAGCTGAACGT
GTTAATTCTTACTCAATTGAGAATTTTATTCAAGGTGATAAGTGGATTCCTCCATCTTCT
TGTTAA

Peptide Sequence

PEP ID

XP_016445873.1
PEP Infomation

PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 [Nicotiana tabacum]
Sequence

MASHFSLPFLSFFLFVSLVSSSISQPPSPSPSPSPNIPIEIQGACKASRDPPTCEASILT
DPSNLTPVQIILSALAVSSQNLTNAQSMVKNLLDTSAGNVNLTVAAKNCLLGFNYSAYRY
NLTAAALPRGEIKDARAWMSAALGYQIGCSSNLLKVNETIQVAETLEVMNTLINFTTNAL
WMTVSYDIHGNDTGLWGPPKTERDGFWEPGSGSGFEFKGVVPSGLNPNVTVCKEGVCDYK
MVQEAVNATPDNLGPWKFVIWIKAGLYDEIVRVPLEKRNVVFLGDGMGKTVITGSLSVGL
VPGMTTYESATVGVSGDGFMASGLTIQNTAGIGAGQAVAFRSDSDLSIIQYCEFLGNQDT
LYTQSLRQYYKSCRVQGSVDFIFGNAAAIFQDCDILVAPRLLNPEKGEKNAVTAHGRLDP
GQSTGYVFQNCSINGTEEYMTLYHSNPKVHKTFLGRPWKEYSRTVFINSNLDVLINSEGW
MPWNGEFALATLYYGEFNNSGAGANITGRVTWSNQIPAERVNSYSIENFIQGDKWIPPSS
C

Transcript Sequence

Gene sequence data has not been registered.